Blog Archives

Running Jupyter with SciKit-learn

For more information on Scikit check out (https://scikit-learn.org/) First start your Jupyter server using the short process: Open https://galaxy.fau.edu Click “Login” Click “Login to Jupyter” Enter your username and password. Click “Login” Click “New” Click “Terminal” Enter “pip install –U

Posted in How-To-Guides

Linux VPN

Florida Atlantic University VPN for Linux For Linux, the Juniper Network Connect client has been deprecated VPN connectivity can be accomplished through use of the Pulse Secure Client for Linux. Currently only Centos/RHEL and Debian/Ubuntu flavors of Linux are supported by the

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Create SLURM launchers for Koko

launcher_creator.py is a convenience utility that automates creating a launcher for FAU clusters based on parameters (and commands) you give it. This tool and most of the following document is based on posts created at TACC. (https://wikis.utexas.edu/display/bioiteam/launcher_creator.py) launcher_creator.py outputs a

Posted in Academic Resources, How-To-Guides

Home Directories Beta

Koko’s home directories are accessible from most FAU networks (except dorms and wireless) via Microsoft Windows File Share. To connect connect to the Koko Data Transfer nodes from Explorer or the Start Menu. If prompted for a user name and

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Perfsonar

We are happy to report that we are working on deploying Perfsonar nodes to aide in the measurement of network metrics. The following test nodes are currently online and being developed. https://perfsonar-research.hpc.fau.edu (131.91.171.216) https://perfsonar-bhric.hpc.fau.edu (131.91.171.215) https://perfsonar-eng.hpc.fau.edu

Posted in How-To-Guides, HPC

Ansys

Ansys is installed on KoKo and may be accessed using the latest ansys module. The module will detect group membership and point users at the most correct license server. At this time only College of Engineering and Computer Science students

Posted in How-To-Guides

LAMMPS

LAMMPS may be run by loading the lmp_openmpi module and the openmpi/gcc module module load openmpi/gcc/64/1.10.1 gcc/5.2.0 lammps/30Mar18 # change 40 to the number of threads. We recommend multiples of 20 salloc -n 40 # where script.in is your input script,

Posted in How-To-Guides, HPC

X2Go

X2Go enables users to access a graphical desktop over low or high bandwidth connections. It provides a remote desktop solution tunneled over SSH supporting file and printer sharing. We recommend that users install the latest version of X2Go by downloading it

Posted in How-To-Guides

APL

GNU APL is installed to KoKo and may be loaded using the module command. module load gnu/apl

Posted in How-To-Guides

R

R has been installed to KoKo and may be loaded using the modules command. module load R

Posted in How-To-Guides