For more information on Scikit check out (https://scikit-learn.org/) First start your Jupyter server using the short process: Open https://galaxy.fau.edu Click “Login” Click “Login to Jupyter” Enter your username and password. Click “Login” Click “New” Click “Terminal” Enter “pip install –U…
Blog Archives
Linux VPN
Florida Atlantic University VPN for Linux For Linux, the Juniper Network Connect client has been deprecated VPN connectivity can be accomplished through use of the Pulse Secure Client for Linux. Currently only Centos/RHEL and Debian/Ubuntu flavors of Linux are supported by the…
Posted in How-To-Guides
Sample SBATCH script
Jobs can be submitted to Koko through two methods, SRUN and SBATCH scripts. We have listed a few sample SBATCH scripts to assist users in building their own scripts to submit jobs. Please see our website here for partition information.…
Posted in How-To-Guides, Support Posts
Matlab Individual Installation Instructions
Downloading the MATLAB installer: Log into the MathWorks website here. Select ‘Get started today’ under the Download MATLAB section. Login with your FAU NetID and password. If you have a MathWorks account, click ‘Log In’ under the Log in to…
Posted in Academic Resources, How-To-Guides
Matlab Installation and Licensing
WARNING: This guide is not intended for student or individual installations of Matlab. Please refer to the MathWorks website here for installation instructions for students or individual systems. To install Matlab on your Windows or Linux system, please use the…
Koko Desktop Environments
Koko has 3 Desktop Environments available. MATE, XFCE, and Openbox. MATE is based on Gnome, the previous Desktop Environment for Koko. It looks and works in much the same was as the previous Desktop for Koko. XFCE is very similar…
Posted in How-To-Guides, Support Posts
Create SLURM launchers for Koko
launcher_creator.py is a convenience utility that automates creating a launcher for FAU clusters based on parameters (and commands) you give it. This tool and most of the following document is based on posts created at TACC. (https://wikis.utexas.edu/display/bioiteam/launcher_creator.py) launcher_creator.py outputs a…
Posted in Academic Resources, How-To-Guides
Tensorflow
Tensorflow utilizing GPU or CPU computation is available on Koko. Partition information can be found here. Please use these instructions for allocating resources: GPU Allocate resources with the command salloc -p <partition> –gres=gpu The gres:gpu number indicates how many GPUs you’d like…
Posted in How-To-Guides, HPC
Connecting to Koko with PuTTY
These instructions indicate that you should connect to “koko.fau.edu”. Please use “koko-login.fau.edu” instead.
Posted in How-To-Guides, HPC
Matlab
Several versions of Matlab are available on Koko. To check which versions are available, please use the command ‘module avail matlab’ in a terminal on Koko. To use Matlab, please use the following commands: module load matlab/<version number> srun -N1…
Posted in How-To-Guides, HPC
